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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47138559_47142166_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47138559 - 47142166

Intron Length:

3608

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTAAA

5'SS Class:

strong_major

3'SS Sequence:

GTGTATGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

GCTGACTTGATT

Flanking Amino Acid:

LLLLLISESMANRDAVLSRI

Intron Amino Acid Position:

888

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

75.9

35.2

Major BPS

76.9

0.67

66.3

40.4

Major PPT

73.5

0.53

69.4

45.7

Minor 5ss

33.8

-1.8

38.1

42.1

Minor BPS

54.1

0.21

1.7

68.42

42.9

Associated Gene:

Gene:

TTC7B

Ensembl Gene ID:

ENSAPLG00000016070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020130

47087944 - 47179505

91562

ENSAPLT00000016803

47087401 - 47175116

87716

ENSAPLT00000042972

47061337 - 47236315

174979

ENSAPLT00000002719

47061337 - 47236315

174979

ENSAPLT00000038034

47061337 - 47236315

174979

ENSAPLT00000027405

47061337 - 47236315

174979