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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47145885_47148005_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47145885 - 47148005

Intron Length:

2121

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTCAATTCTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TATCTTTCAATT

Flanking Amino Acid:

ETRTTQNLRMTIARQLAEIL

Intron Amino Acid Position:

809

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

85.8

25.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

75.2

0.57

0.9

69.9

36.1

Minor 5ss

-0.9

2.9

43.6

Minor BPS

58.8

0.35

1.5

74.41

36.5

Associated Gene:

Gene:

TTC7B

Ensembl Gene ID:

ENSAPLG00000016070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020130

47087944 - 47179505

91562

ENSAPLT00000016803

47087401 - 47175116

87716

ENSAPLT00000042972

47061337 - 47236315

174979

ENSAPLT00000002719

47061337 - 47236315

174979

ENSAPLT00000038034

47061337 - 47236315

174979

ENSAPLT00000027405

47061337 - 47236315

174979