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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47162502_47173900_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47162502 - 47173900

Intron Length:

11399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATTG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TAGTTTTTAATG

Flanking Amino Acid:

RMIAEAYSTKGLCLEKLPIS

Intron Amino Acid Position:

698

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.8

0.99

0.8

81.6

33.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

88.3

0.86

0.8

85.9

32.8

Minor 5ss

41.6

-0.9

3.1

55.7

48.5

Minor BPS

66.1

0.37

1.3

63.45

39.3

Associated Gene:

Gene:

TTC7B

Ensembl Gene ID:

ENSAPLG00000016070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027405

47061337 - 47236315

174979

ENSAPLT00000020130

47087944 - 47179505

91562

ENSAPLT00000016803

47087401 - 47175116

87716

ENSAPLT00000042972

47061337 - 47236315

174979

ENSAPLT00000002719

47061337 - 47236315

174979

ENSAPLT00000038034

47061337 - 47236315

174979