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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47223516_47225513_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47223516 - 47225513

Intron Length:

1998

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTGGTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTGATTCAACC

Flanking Amino Acid:

DEIKQHPFFQNINWDDLAAK

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.3

32.6

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

74.8

0.56

Minor 5ss

30.9

-2.2

3.2

46.4

Minor BPS

55.6

0.16

1.8

71.44

39.9

Associated Gene:

Gene:

TTC7B

Ensembl Gene ID:

ENSAPLG00000016070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002719

47061337 - 47236315

174979

ENSAPLT00000042972

47061337 - 47236315

174979

ENSAPLT00000038034

47061337 - 47236315

174979

ENSAPLT00000027405

47061337 - 47236315

174979