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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47307262_47308758_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
47307262 - 47308758

Intron Length:
1497

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTCAGTGTT

5'SS Class:
major

3'SS Sequence:
TGATCAATGACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTTGAT

U12 Branch Point Sequence:
TTATTGTTGATC

Flanking Amino Acid:
HGAPIHIGDPGLLGIQDLSK

Intron Amino Acid Position:
203

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.6
0.6
1.3
77.9
36.8

Major BPS
81.2
0.78
1.1
71.4
45.1

Major PPT
61.1
0.25
1.1
55.2
43.6

Minor 5ss
34.2
-1.8
3.3
46.9
42.8

Minor BPS
54.1
0.11
2
69.35
36.7

Associated Gene:

Gene:
DGLUCY

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

47295171 - 47521035
225865

47286771 - 47321725
34955

47295171 - 47326873
31703

47285011 - 47327306
42296

47299237 - 47326873
27637

47298456 - 47321725
23270