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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47368059_47368857_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47368059 - 47368857

Intron Length:

799

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCTTG

5'SS Class:

strong_major

3'SS Sequence:

TCATGTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TGTTTGTTAAAT

Flanking Amino Acid:

EVEFASTRQHVSRPNSLESS

Intron Amino Acid Position:

1467

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

71.5

41.1

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

82.9

0.74

0.9

80.4

36.9

Minor 5ss

47.6

-0.2

2.8

61.4

44.4

Minor BPS

59.7

0.38

2.1

81.62

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004247

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032087

47363572 - 47416527

52956

ENSAPLT00000029880

47362253 - 47371832

9580

ENSAPLT00000004446

47363572 - 47416527

52956

ENSAPLT00000037638

47362253 - 47416527

54275