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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47368927_47369328_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47368927 - 47369328

Intron Length:

402

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTAGT

5'SS Class:

strong_major

3'SS Sequence:

ATGTTCTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

GCCTTCTAAATT

Flanking Amino Acid:

PISRLQSRPKGYNSEDNLSE

Intron Amino Acid Position:

1444

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

79.6

35.4

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

0.67

0.8

78.2

35.7

Minor 5ss

38.1

-1.3

2.7

51.1

45.4

Minor BPS

55.8

0.26

1.7

67.31

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004247

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017415

47362253 - 47416527

54275

ENSAPLT00000004446

47363572 - 47416527

52956

ENSAPLT00000037638

47362253 - 47416527

54275

ENSAPLT00000032087

47363572 - 47416527

52956

ENSAPLT00000029880

47362253 - 47371832

9580