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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47373549_47375019_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47373549 - 47375019

Intron Length:

1471

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

CATGCTTCATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

GTGTTTTGAATC

Flanking Amino Acid:

QYKFYDPAPKKKNHWIGARA

Intron Amino Acid Position:

1302

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

72.6

37.3

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

64.9

0.34

0.9

63.5

37.8

Minor 5ss

37.2

-1.4

2.9

46.5

35.3

Minor BPS

57.3

0.21

1.4

63.1

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004247

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037638

47362253 - 47416527

54275

ENSAPLT00000032087

47363572 - 47416527

52956

ENSAPLT00000017415

47362253 - 47416527

54275

ENSAPLT00000004446

47363572 - 47416527

52956