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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47385506_47386577_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47385506 - 47386577

Intron Length:

1072

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGAGGAAA

5'SS Class:

major

3'SS Sequence:

TCATGTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CTATTCTCATGT

Flanking Amino Acid:

LLQDDNGNDDTKYKILESKT

Intron Amino Acid Position:

856

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.3

70.9

36.4

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

80.3

0.68

0.9

77.1

36.9

Minor 5ss

27.5

-2.6

29.7

36.3

Minor BPS

-0.2

64.24

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004247

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037638

47362253 - 47416527

54275

ENSAPLT00000032087

47363572 - 47416527

52956

ENSAPLT00000017415

47362253 - 47416527

54275

ENSAPLT00000004446

47363572 - 47416527

52956