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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47395361_47396587_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47395361 - 47396587

Intron Length:

1227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTGAGTACC

5'SS Class:

major

3'SS Sequence:

CATGTTTCAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CATGTTTCAACA

Flanking Amino Acid:

QLSKSTDLADTRKSFVFELN

Intron Amino Acid Position:

350

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

70.4

33.4

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

71.1

0.48

39.4

Minor 5ss

33.4

-1.9

2.7

39.9

32.9

Minor BPS

50.3

1.6

59.7

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004247

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017415

47362253 - 47416527

54275

ENSAPLT00000004446

47363572 - 47416527

52956

ENSAPLT00000037638

47362253 - 47416527

54275

ENSAPLT00000032087

47363572 - 47416527

52956