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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47398008_47404321_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47398008 - 47404321

Intron Length:

6314

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

AAGAGATTAACA

Flanking Amino Acid:

DVDFYKARMEELREDNIILI

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.7

82.6

33.6

Major BPS

78.2

0.7

77.9

32.1

Major PPT

88.3

0.86

0.6

82.1

Minor 5ss

21.7

-3.3

3.8

30.8

43.1

Minor BPS

47.2

-0.2

57.23

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004247

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032087

47363572 - 47416527

52956

ENSAPLT00000017415

47362253 - 47416527

54275

ENSAPLT00000004446

47363572 - 47416527

52956

ENSAPLT00000037638

47362253 - 47416527

54275