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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47405047_47405628_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47405047 - 47405628

Intron Length:

582

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTCAC

5'SS Class:

major

3'SS Sequence:

TAATCCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTTTCTAATC

Flanking Amino Acid:

KAKLRRIRQELEEKSEQLVD

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.1

61.7

38.8

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

80.8

0.69

0.9

77.7

36.1

Minor 5ss

-2.1

45.5

42.6

Minor BPS

66.1

0.48

1.6

78.18

31.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004247

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017415

47362253 - 47416527

54275

ENSAPLT00000004446

47363572 - 47416527

52956

ENSAPLT00000037638

47362253 - 47416527

54275