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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47405814_47406593_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47405814 - 47406593

Intron Length:

780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACCTTGA

5'SS Class:

major

3'SS Sequence:

TCTGTATTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTCTCTGTATTT

Flanking Amino Acid:

LIDERDECTEVIVDLTQERD

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.2

66.1

42.4

Major BPS

88.7

0.96

0.8

36.5

Major PPT

82.2

0.72

0.9

73.4

Minor 5ss

-0.6

2.9

59.1

45.3

Minor BPS

49.8

0.06

2.2

74.81

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004247

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017415

47362253 - 47416527

54275

ENSAPLT00000004446

47363572 - 47416527

52956

ENSAPLT00000037638

47362253 - 47416527

54275