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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47409870_47416457_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47409870 - 47416457

Intron Length:

6588

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TATTGCATATAC

Flanking Amino Acid:

VLMIGKDPLSGKSMDEIKKL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

79.6

35.4

Major BPS

79.2

0.73

75.3

39.4

Major PPT

85.1

0.79

0.7

78.2

30.6

Minor 5ss

32.1

-2

2.8

39.3

41.2

Minor BPS

44.8

-0.4

2.3

62.05

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004247

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017415

47362253 - 47416527

54275

ENSAPLT00000004446

47363572 - 47416527

52956

ENSAPLT00000037638

47362253 - 47416527

54275

ENSAPLT00000032087

47363572 - 47416527

52956