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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47467040_47468455_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47467040 - 47468455

Intron Length:

1416

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTCA

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TTTTCTTAAAGT

Flanking Amino Acid:

TSQMAAITTKGGLVGLVDYP

Intron Amino Acid Position:

661

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

79.6

29.3

Major BPS

76.9

0.67

66.3

40.4

Major PPT

0.65

0.8

73.7

31.3

Minor 5ss

40.6

-1.1

2.7

51.2

45.1

Minor BPS

66.1

0.58

1.9

87.23

Associated Gene:

Gene:

PPP4R3A

Ensembl Gene ID:

ENSAPLG00000004317

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004485

47466926 - 47499711

32786