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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47473713_47474966_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47473713 - 47474966

Intron Length:

1254

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTTAG

5'SS Class:

major

3'SS Sequence:

ATCTCTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTTTAATAACA

Flanking Amino Acid:

MASKHAFLALCALRFKRKII

Intron Amino Acid Position:

417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.1

67.9

39.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.8

0.67

0.9

76.9

36.7

Minor 5ss

41.5

-0.9

2.8

46.2

Minor BPS

56.6

0.2

1.9

73.11

38.5

Associated Gene:

Gene:

PPP4R3A

Ensembl Gene ID:

ENSAPLG00000004317

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004485

47466926 - 47499711

32786