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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47567239_47569091_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47567239 - 47569091

Intron Length:

1853

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTGCT

5'SS Class:

major

3'SS Sequence:

CTTCTGCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

TAATCCAGATGT

Flanking Amino Acid:

LDISPPSKSSVCHAELQVGT

Intron Amino Acid Position:

349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.1

72.2

37.5

Major BPS

78.2

0.7

77.9

32.1

Major PPT

78.6

0.64

0.8

73.2

31.7

Minor 5ss

38.2

-1.3

3.4

60.6

43.7

Minor BPS

43.7

-0.4

2.1

64.38

Associated Gene:

Gene:

TC2N

Ensembl Gene ID:

ENSAPLG00000005130

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005302

47563704 - 47584819

21116