Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_47571026_47571917_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47571026 - 47571917

Intron Length:

892

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTACAGTTT

5'SS Class:

major

3'SS Sequence:

TTTTTATCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATCC

Flanking Amino Acid:

KESQGSNRSLDTITLSGDER

Intron Amino Acid Position:

212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.1

0.33

1.1

63.9

42.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

85.8

0.8

0.7

29.9

Minor 5ss

40.5

-1.1

3.7

55.1

49.1

Minor BPS

71.4

0.65

1.5

81.41

33.2

Associated Gene:

Gene:

TC2N

Ensembl Gene ID:

ENSAPLG00000005130

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005302

47563704 - 47584819

21116