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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47581224_47584680_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

47581224 - 47584680

Intron Length:

3457

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

GTTACTTTTATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTTACTTTTATA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

78.5

35.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.6

0.64

0.9

72.8

37.4

Minor 5ss

40.6

-1.1

2.8

58.6

39.3

Minor BPS

0.24

1.6

68.5

37.6

Associated Gene:

Gene:

TC2N

Ensembl Gene ID:

ENSAPLG00000005130

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005302

47563704 - 47584819

21116