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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47621129_47622151_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
47621129 - 47622151

Intron Length:
1023

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACTGTGT

5'SS Class:
major

3'SS Sequence:
TGGTTTCCCGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CACTGAT

U12 Branch Point Sequence:
AAGTCACTGATG

Flanking Amino Acid:
TLNDDGRSCQDVNECTGENP

Intron Amino Acid Position:
203

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.2
0.48
1.1
63.4
43.3

Major BPS
71.2
0.53
1
61
37.5

Major PPT
75.3
0.57
0.9
69.9
36.6

Minor 5ss
37.5
-1.4
3.5
56.6
47.6

Minor BPS
44.3
-0.5
1.9
47.55
39.5

Associated Gene:

Gene:
FBLN5

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

47613321 - 47658340
45020