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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47677835_47678397_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47677835 - 47678397

Intron Length:

563

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCTT

5'SS Class:

strong_major

3'SS Sequence:

TTAAACCTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTAAACC

Flanking Amino Acid:

LGIKKEELDQLLSEEQRGVT

Intron Amino Acid Position:

1826

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

75.3

40.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

69.1

0.43

0.9

59.5

42.2

Minor 5ss

36.8

-1.5

3.5

56.4

47.8

Minor BPS

70.5

0.62

1.6

81.25

33.5

Associated Gene:

Gene:

TRIP11

Ensembl Gene ID:

ENSAPLG00000005484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026329

47674163 - 47703647

29485

ENSAPLT00000005690

47674572 - 47703647

29076