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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47678513_47679273_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47678513 - 47679273

Intron Length:

761

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTAAC

U12 Branch Point Sequence:

GGCAGTGTAACA

Flanking Amino Acid:

LINSTEGKVDKLLMRNLFVG

Intron Amino Acid Position:

1787

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

56.8

0.17

1.4

61.4

43.2

Major PPT

92.6

0.96

0.7

88.3

28.9

Minor 5ss

40.5

-1.1

Minor BPS

41.3

-0.6

2.3

48.96

41.9

Associated Gene:

Gene:

TRIP11

Ensembl Gene ID:

ENSAPLG00000005484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005690

47674572 - 47703647

29076

ENSAPLT00000026329

47674163 - 47703647

29485