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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47685246_47686770_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47685246 - 47686770

Intron Length:

1525

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATCTTT

5'SS Class:

major

3'SS Sequence:

TTTTTTCATTAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCTTCATTATCT

Flanking Amino Acid:

VSSSTAVENASHQASLQVES

Intron Amino Acid Position:

1637

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

76.8

34.7

Major BPS

100

1.24

0.5

100

Major PPT

78.6

0.64

84.4

29.9

Minor 5ss

44.4

-0.6

3.1

64.6

46.7

Minor BPS

0.58

1.9

85.15

41.2

Associated Gene:

Gene:

TRIP11

Ensembl Gene ID:

ENSAPLG00000005484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026329

47674163 - 47703647

29485

ENSAPLT00000005690

47674572 - 47703647

29076