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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47693999_47694456_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

47693999 - 47694456

Intron Length:

458

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CATTTGACCTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TAATACTTAATA

Flanking Amino Acid:

EENIKLKKEKEGLEKELLHA

Intron Amino Acid Position:

447

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.8

81.4

30.7

Major BPS

100

1.24

0.5

100

Major PPT

58.9

0.2

1.1

61.3

38.8

Minor 5ss

43.3

-0.7

3.1

60.6

44.5

Minor BPS

70.5

0.64

1.4

74.91

Associated Gene:

Gene:

TRIP11

Ensembl Gene ID:

ENSAPLG00000005484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026329

47674163 - 47703647

29485

ENSAPLT00000005690

47674572 - 47703647

29076