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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47697859_47698696_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47697859 - 47698696

Intron Length:

838

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TAATCGTGATCA

Flanking Amino Acid:

EVDHWKQIAQSSKVQGTNVA

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

22.3

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

91.9

0.94

0.6

91.8

19.1

Minor 5ss

28.9

-2.4

3.2

39.6

46.4

Minor BPS

46.3

-0.2

2.3

62.64

Associated Gene:

Gene:

TRIP11

Ensembl Gene ID:

ENSAPLG00000005484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026329

47674163 - 47703647

29485

ENSAPLT00000005690

47674572 - 47703647

29076