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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47698970_47700092_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47698970 - 47700092

Intron Length:

1123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGATAC

5'SS Class:

strong_major

3'SS Sequence:

TCTATATGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TCTTACTGAAAC

Flanking Amino Acid:

EYRNQLQQKEVEISHLKARQ

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

73.8

30.9

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

75.9

0.58

73.5

40.8

Minor 5ss

44.3

-0.6

2.8

58.5

46.3

Minor BPS

57.5

0.21

1.8

69.94

40.8

Associated Gene:

Gene:

TRIP11

Ensembl Gene ID:

ENSAPLG00000005484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005690

47674572 - 47703647

29076

ENSAPLT00000026329

47674163 - 47703647

29485