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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47700204_47701127_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47700204 - 47701127

Intron Length:

924

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TCATTTTTGCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

AATTTACTAACA

Flanking Amino Acid:

ESINAALKSENERLKKICSD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

83.5

27.6

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

73.5

0.53

69.4

41.5

Minor 5ss

36.9

-1.5

3.1

49.9

40.5

Minor BPS

53.1

0.09

1.9

69.06

36.3

Associated Gene:

Gene:

TRIP11

Ensembl Gene ID:

ENSAPLG00000005484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026329

47674163 - 47703647

29485

ENSAPLT00000005690

47674572 - 47703647

29076