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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47713361_47713612_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47713361 - 47713612

Intron Length:

252

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAGTA

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TACAATTTATTT

Flanking Amino Acid:

ALFLAQLQQEGYSIFVVKGD

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

77.1

31.3

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

93.6

0.98

0.6

92.5

25.6

Minor 5ss

34.1

-1.8

3.5

47.4

47.9

Minor BPS

47.4

-0.1

1.7

62.49

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006002

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034148

47713224 - 47722173

8950

ENSAPLT00000023211

47711152 - 47722173

11022

ENSAPLT00000020841

47711161 - 47718236

7076

ENSAPLT00000006264

47711161 - 47721553

10393

ENSAPLT00000041301

47713224 - 47722173

8950