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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47716639_47717954_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47716639 - 47717954

Intron Length:

1316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTTGACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TGTTTTTTGACA

Flanking Amino Acid:

MDDSGFFSIQVISNALKVWG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

88.1

25.2

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

82.4

0.73

79.9

37.7

Minor 5ss

40.3

-1.1

3.4

58.5

40.4

Minor BPS

73.4

0.73

1.1

78.31

31.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006002

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034148

47713224 - 47722173

8950

ENSAPLT00000023211

47711152 - 47722173

11022

ENSAPLT00000006264

47711161 - 47721553

10393

ENSAPLT00000036979

47713295 - 47722173

8879