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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47718000_47722149_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

47718000 - 47722149

Intron Length:

4150

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

TCACGCTGAGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TCCCTCCCAATC

Flanking Amino Acid:

MEAIFHERQPSVNMDDSG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

45.2

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

59.4

0.21

1.1

54.6

39.9

Minor 5ss

29.9

-2.3

3.2

29.1

43.5

Minor BPS

44.7

-0.4

1.8

52.03

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006002

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034148

47713224 - 47722173

8950