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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47718708_47722149_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47718708 - 47722149

Intron Length:

3442

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

TTTCCAATGTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TCTTTTCCAATG

Flanking Amino Acid:

MEAIFHERQEGSLCAQHC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

45.2

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

67.9

0.4

67.6

37.9

Minor 5ss

29.9

-2.3

3.2

29.1

43.5

Minor BPS

46.9

-0.3

1.9

55.24

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006002

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046789

47713295 - 47722173

8879

ENSAPLT00000041301

47713224 - 47722173

8950

ENSAPLT00000036979

47713295 - 47722173

8879

ENSAPLT00000023211

47711152 - 47722173

11022