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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47730781_47731327_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47730781 - 47731327

Intron Length:

547

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTATGTATT

5'SS Class:

major

3'SS Sequence:

TAATTTTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTGTTTTAATT

Flanking Amino Acid:

RRKQRDEQLLTNVLETLRGD

Intron Amino Acid Position:

460

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.1

77.2

37.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.8

0.69

0.8

41.1

Minor 5ss

-0.1

2.5

40.2

Minor BPS

74.3

0.84

1.2

86.64

33.8

Associated Gene:

Gene:

CPSF2

Ensembl Gene ID:

ENSAPLG00000006330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006614

47724695 - 47741210

16516