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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47732231_47733301_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47732231 - 47733301

Intron Length:

1071

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTCTATCTGTAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTAATGTTAATT

Flanking Amino Acid:

NPSEKVIDIELRRRVKLEGK

Intron Amino Acid Position:

620

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

65.7

0.35

1.2

71.8

38.1

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

50.5

0.1

2.1

69.87

41.2

Associated Gene:

Gene:

CPSF2

Ensembl Gene ID:

ENSAPLG00000006330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006614

47724695 - 47741210

16516