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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47736078_47737911_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47736078 - 47737911

Intron Length:

1834

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTAC

5'SS Class:

strong_major

3'SS Sequence:

TTGTGCAACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTTGTGCAACC

Flanking Amino Acid:

DATSETHIYQVRLKDSLVSS

Intron Amino Acid Position:

847

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.9

78.4

32.4

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

64.7

0.33

55.9

43.7

Minor 5ss

44.1

-0.6

2.9

58.3

46.6

Minor BPS

46.9

-0.2

2.5

70.01

41.9

Associated Gene:

Gene:

CPSF2

Ensembl Gene ID:

ENSAPLG00000006330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006614

47724695 - 47741210

16516