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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47739259_47739363_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47739259 - 47739363

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTGTT

5'SS Class:

major

3'SS Sequence:

TCTTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

AGATAATAAACT

Flanking Amino Acid:

VCNNLVAVRRTETGRIGLEG

Intron Amino Acid Position:

992

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

1.1

76.2

39.9

Major BPS

70.8

0.52

70.6

31.6

Major PPT

89.3

0.88

0.8

87.9

29.4

Minor 5ss

36.8

-1.5

3.6

48.8

47.3

Minor BPS

47.2

-0.1

2.1

66.83

42.9

Associated Gene:

Gene:

CPSF2

Ensembl Gene ID:

ENSAPLG00000006330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006614

47724695 - 47741210

16516