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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47806310_47857714_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47806310 - 47857714

Intron Length:

51405

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATGG

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTGTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTCAT

U12 Branch Point Sequence:

GATGCTGTAAAA

Flanking Amino Acid:

THEGKNCTEPAINEFPEDVF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.9

72.5

39.9

Major BPS

0.67

1.1

77.7

37.1

Major PPT

86.7

0.82

0.8

84.6

Minor 5ss

37.3

-1.4

47.6

47.9

Minor BPS

46.4

-0.2

2.1

58.26

41.2

Associated Gene:

Gene:

SLC24A4

Ensembl Gene ID:

ENSAPLG00000006958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033727

47806261 - 47892685

86425

ENSAPLT00000007256

47806261 - 47890572

84312