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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47857316_47857714_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

47857316 - 47857714

Intron Length:

399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTATT

5'SS Class:

major

3'SS Sequence:

GTTTTTGTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTCAT

U12 Branch Point Sequence:

GATGCTGTAAAA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

1.1

84.7

32.4

Major BPS

0.67

1.1

77.7

37.1

Major PPT

86.7

0.82

0.8

84.6

Minor 5ss

44.1

-0.6

2.5

60.5

43.9

Minor BPS

46.4

-0.2

2.1

58.26

41.2

Associated Gene:

Gene:

SLC24A4

Ensembl Gene ID:

ENSAPLG00000006958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029646

47857225 - 47890108

32884