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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47857792_47858895_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47857792 - 47858895

Intron Length:

1104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

TATTTTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

ATTTCCTGAATT

Flanking Amino Acid:

QGGVLLHIIAALYMFYALAI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

81.2

33.5

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

89.8

0.9

0.7

84.5

30.1

Minor 5ss

-0.1

2.8

77.2

37.5

Minor BPS

79.7

1.01

1.2

91.67

30.7

Associated Gene:

Gene:

SLC24A4

Ensembl Gene ID:

ENSAPLG00000006958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029904

47842903 - 47890108

47206

ENSAPLT00000029646

47857225 - 47890108

32884

ENSAPLT00000017489

47842903 - 47890108

47206

ENSAPLT00000033727

47806261 - 47892685

86425

ENSAPLT00000007256

47806261 - 47890572

84312