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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47865762_47866220_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47865762 - 47866220

Intron Length:

459

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTCTCTGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

TTTTCCTTTTTT

Flanking Amino Acid:

IVFIYDEKIEWWESLILIIM

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

34.9

Major BPS

77.3

0.68

79.3

29.4

Major PPT

60.5

0.24

1.7

73.3

37.1

Minor 5ss

42.1

-0.9

2.9

55.5

43.9

Minor BPS

48.5

-0

3.6

87.87

37.8

Associated Gene:

Gene:

SLC24A4

Ensembl Gene ID:

ENSAPLG00000006958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033727

47806261 - 47892685

86425

ENSAPLT00000029646

47857225 - 47890108

32884

ENSAPLT00000017489

47842903 - 47890108

47206

ENSAPLT00000007256

47806261 - 47890572

84312