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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47865762_47867294_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47865762 - 47867294

Intron Length:

1533

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCACTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

CTTTTCAGACCG

Flanking Amino Acid:

IVFIYDEKIEWYNVRMQNFF

Intron Amino Acid Position:

158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

34.9

Major BPS

0.65

1.5

85.7

34.9

Major PPT

84.9

0.79

0.7

81.9

28.8

Minor 5ss

42.1

-0.9

2.9

55.5

43.9

Minor BPS

45.4

-0.4

56.51

44.9

Associated Gene:

Gene:

SLC24A4

Ensembl Gene ID:

ENSAPLG00000006958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029904

47842903 - 47890108

47206