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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47884924_47885727_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47884924 - 47885727

Intron Length:

804

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCACG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

TTCCTTTTAAAG

Flanking Amino Acid:

ALFSYFMVWMENIVKKQPAC

Intron Amino Acid Position:

385

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

42.9

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

80.6

0.69

27.2

Minor 5ss

39.8

-1.1

2.8

47.1

42.4

Minor BPS

58.2

0.12

1.5

61.29

40.8

Associated Gene:

Gene:

SLC24A4

Ensembl Gene ID:

ENSAPLG00000006958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029904

47842903 - 47890108

47206

ENSAPLT00000017489

47842903 - 47890108

47206