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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47884924_47887149_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47884924 - 47887149

Intron Length:

2226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCACG

5'SS Class:

strong_major

3'SS Sequence:

CCTCACTGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAA

U12 Branch Point Sequence:

CTTTCCTCACTG

Flanking Amino Acid:

ALFSYFMVWMVTVIGYTLGI

Intron Amino Acid Position:

391

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

42.9

Major BPS

68.1

0.45

1.3

78.7

34.9

Major PPT

71.8

0.49

0.9

68.6

36.9

Minor 5ss

39.8

-1.1

2.8

47.1

42.4

Minor BPS

53.9

-0

1.9

63.16

45.2

Associated Gene:

Gene:

SLC24A4

Ensembl Gene ID:

ENSAPLG00000006958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033727

47806261 - 47892685

86425

ENSAPLT00000029646

47857225 - 47890108

32884

ENSAPLT00000007256

47806261 - 47890572

84312