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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47885782_47887149_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47885782 - 47887149

Intron Length:

1368

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTATGTCTT

5'SS Class:

major

3'SS Sequence:

CCTCACTGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAA

U12 Branch Point Sequence:

CTTTCCTCACTG

Flanking Amino Acid:

ACFVLRLCIHVTVIGYTLGI

Intron Amino Acid Position:

403

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

76.5

38.6

Major BPS

68.1

0.45

1.3

78.7

34.9

Major PPT

71.8

0.49

0.9

68.6

36.9

Minor 5ss

48.7

-0.1

2.8

71.9

37.9

Minor BPS

53.9

-0

1.9

63.16

45.2

Associated Gene:

Gene:

SLC24A4

Ensembl Gene ID:

ENSAPLG00000006958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029904

47842903 - 47890108

47206

ENSAPLT00000017489

47842903 - 47890108

47206