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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47887265_47889084_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47887265 - 47889084

Intron Length:

1820

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTGTGC

5'SS Class:

major

3'SS Sequence:

TTTTCCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTGTTTTTACCT

Flanking Amino Acid:

CMASLIVARQGLGDMAVSNT

Intron Amino Acid Position:

429

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.6

0.44

1.1

57.6

42.5

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

0.97

0.6

88.6

20.7

Minor 5ss

35.8

-1.6

3.5

50.2

46.4

Minor BPS

67.4

0.62

1.6

82.67

39.4

Associated Gene:

Gene:

SLC24A4

Ensembl Gene ID:

ENSAPLG00000006958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029904

47842903 - 47890108

47206

ENSAPLT00000029646

47857225 - 47890108

32884

ENSAPLT00000017489

47842903 - 47890108

47206

ENSAPLT00000007256

47806261 - 47890572

84312

ENSAPLT00000033727

47806261 - 47892685

86425