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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47889198_47889850_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

47889198 - 47889850

Intron Length:

653

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTATGTATC

5'SS Class:

weak_major

3'SS Sequence:

CTAATTCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATGTTTTTAATT

Flanking Amino Acid:

QTMAIDCGSTVKINSKGLVY

Intron Amino Acid Position:

467

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

71.2

38.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

71.7

0.49

0.9

65.2

Minor 5ss

49.3

-0

2.5

72.8

36.5

Minor BPS

73.6

0.82

1.1

81.25

Associated Gene:

Gene:

SLC24A4

Ensembl Gene ID:

ENSAPLG00000006958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029904

47842903 - 47890108

47206

ENSAPLT00000029646

47857225 - 47890108

32884

ENSAPLT00000017489

47842903 - 47890108

47206

ENSAPLT00000007256

47806261 - 47890572

84312

ENSAPLT00000033727

47806261 - 47892685

86425