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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47944500_47953146_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47944500 - 47953146

Intron Length:

8647

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

CATCTCTATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

TTACCATGAAAT

Flanking Amino Acid:

DLEIISSLGIDAIAESSLYK

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.8

78.8

35.5

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

75.4

0.57

0.9

69.7

35.3

Minor 5ss

35.5

-1.6

2.8

45.4

42.6

Minor BPS

52.1

0.15

1.8

74.81

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023022

47901276 - 47953862

52587