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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47978774_47980460_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47978774 - 47980460

Intron Length:

1687

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGCAAT

5'SS Class:

major

3'SS Sequence:

ACTGGTCTTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

AAAACCAAAACC

Flanking Amino Acid:

MMNHLADHINVYATTAANPR

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

0.9

75.8

35.2

Major BPS

0.3

62.3

30.4

Major PPT

73.4

0.53

40.8

Minor 5ss

35.7

-1.6

45.4

43.9

Minor BPS

46.9

-0.2

1.9

57.23

40.4

Associated Gene:

Gene:

LGMN

Ensembl Gene ID:

ENSAPLG00000007964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008300

47974177 - 47993756

19580