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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48009697_48009896_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

48009697 - 48009896

Intron Length:

200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGTAA

5'SS Class:

major

3'SS Sequence:

ATGTCTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAA

U12 Branch Point Sequence:

TTATCAACACCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

65.4

36.8

Major BPS

0.72

80.3

31.7

Major PPT

81.9

0.72

0.9

73.6

41.2

Minor 5ss

34.3

-1.8

3.5

46.3

Minor BPS

-0.3

2.2

71.85

44.2

Associated Gene:

Gene:

GOLGA5

Ensembl Gene ID:

ENSAPLG00000008788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009171

48009219 - 48026576

17358