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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48018458_48020371_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48018458 - 48020371

Intron Length:

1914

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

ATCTATTTCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TCTTTGTGATCT

Flanking Amino Acid:

TEAELERQKQELHYTEEELY

Intron Amino Acid Position:

547

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.5

0.8

87.7

27.9

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

74.1

0.54

0.8

69.5

35.8

Minor 5ss

33.9

-1.8

3.3

47.8

47.9

Minor BPS

46.9

-0.1

2.3

71.9

45.2

Associated Gene:

Gene:

GOLGA5

Ensembl Gene ID:

ENSAPLG00000008788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009171

48009219 - 48026576

17358