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Intron Name: Anas_platyrhynchos_platyrhynchos_5_48024489_48026266_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48024489 - 48026266

Intron Length:

1778

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

GATAAGTTAATG

Flanking Amino Acid:

IARVFVIIYMALLHLWVMIV

Intron Amino Acid Position:

712

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

86.3

0.82

0.7

79.8

32.2

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

45.1

-0.5

2.2

51.34

42.7

Associated Gene:

Gene:

GOLGA5

Ensembl Gene ID:

ENSAPLG00000008788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009171

48009219 - 48026576

17358